Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806762.1_cds_XP_016494526.1_8928
CDS Infomation

[gene=LOC107813741] [db_xref=GeneID:107813741] [protein=tetratricopeptide repeat protein 7B-like] [protein_id=XP_016494526.1] [location=join(5628..5733,6250..6419,7292..7544,7787..9003,9641..9794,10897..11153)] [gbkey=CDS]
Sequence

ATGTTTTTGGTTGTTGGTGAACTTTTCTGGATTATTGAGTTTTTGTTTCAGTTCTGTAAT
TGGTTAAACCCTTTGTGTTTAGCTCAACTGAGGAGGCTCTGTTTGGGGGAACAACTGAGG
ATTGAAGATATTATTCCATCATCCGAGTCTCTTGCAACTCGAGACTATTCAGCTAGTGGG
TATTCTTCGCGTGCCGGAGATGACGCCAAGGCAGACACCAGTAACATAGAAGAAGCAGAA
TCATCACTTCGTGAGAGTGGCATTTTGAATTATGAGGAAGCAAGAGCATTATTAGGTCGG
CTTGAGTATCAAAAAGGTAACATTGAGGCTGCTCTTCATGTATTTGAGGGAATAGATATT
GCTGCGGTGGTTCCGAAGATAAAACTTTCGATTGCAAGAAGATGTGAGATACCAAGACGG
AATTCACTTAGCGACGCTATCCCACCTATGTCAATGCATGCAGTAAGTCTGCTCTTTGAG
GCCATTTTACTCAAAGCAACATCCCTGCAGGCACTTGGGAGGTTTACAGAAGCTGCTCAG
TCGTGTACAGTGATACTGGATACAGTTGAGTCTGCTTTGCCAGATGGCTTACATGAGAAC
TTTTCTGCTGATTGCAAATTGTTGGAAACCTTGAACAAGGCGGTGGAGTTACTTCCTGAG
CTGTGGAAGCTAGCTTGTGCTCCTCAAGAAGCAATCTTGTCATATAGAAGGGCCCTGCTT
TATCGGTGGAATCTTGATGTGGAAACGAGAAGCAAAATAGAAAAGCAGTATGCTATATTT
CTCTTATACAGTGGCACTGATGCAGCTCCTCCAAATCTTCGCGCACAGGCAGAAGGTTCC
TTCATACCTAGAAACAATATAGAAGAAGCTATTTTGCTGCTTCTGGTCCTTCTAAGAAGA
TACATCGTCAATAAAATTGTATGGGATCCATCGATCTTGGATCACCTCTGCTTTGCATTA
TCCATTGCAGGTGAGTTTAGGGCACTCGCCCATCAGGTTGAGGAGTTGCTCCCTGGAATT
GTTGTTAGAAGACAAAAGTACACTACCCTTGCCCTGTGTTATTATGCAGAAGGTGATGAC
ATGGTCTCTTTGAATCTGTTAAGGAACCTGATGAATAACAGGGACAACGAGAACGGCATA
TTTGAGTTACTACTTGCTGCCAAAATTTGTGCAGAGTATCCCAATTTATCGGAAGAAGGG
ATGGGGTATGCCCGGAAAGTGCTCCCAAAAATTGATGGGAAATGTAACCAGATGGCTAGT
GTTGCAAAATGCTTACTTGGTCTTCTGCTCTCAGGTCGATCTCGTGCCCTCGTGTCTGAT
TCTGAGAGAACGTCAAGACTGAGTGAAGCTCTTGAATCACTTGAATCGGCACAAAAGATA
ACTGAAGGAAGAAATCCTACTGTTCTTTTCTACCTTAGTTTGGAGAATGCAGAGCAGAGA
AAGTTGGATATTGCTCTCTACTATGCAAAGCAGCTGTTGAAGTTGGAGGGAGGATCTACT
GTCAGAGGATGGCTTCTTCTTGCTCGTATACTATCTGCTCAAAAGAGGTATATAGATGCA
GAAAACATAATTAATGCTGCACTAGACGAAACAGGAAAATGGAATCAAGGAGAACTACTA
CGCACTAAGGCGAAACTACAGATTGCCCAGGAACATCTGCGGGATGCGGTGGAGACATAT
ACTCATCTTCTTTCTGTACTCCAAGTTCAGAGAAAAAGTTTTGGAGTTCAGAAAAAGTTG
TTAAAGAACATGAGAAACAACACTAGAAGTTTAGAAATGGAAACATGGCATGACCTAGCA
AATGTGTACACAAGCTTGTCTCAGTGGCGTGATGCGGAGGTTTGCCTAATCAAATCTGAG
GCTATCAATCCTCATTCTGCTTCAAGATGCCACTCTGCAGGGTTACTCTATCAAGCTAGA
GGACTCCACAAAGAGGCATTACAATCTTTTCAGAAGGCTTTAGACATAGAACCAAACCAT
GTTCCTAGTTTGGTTTCCACTGCCATTGTTCTTCGACAACTCAGCGGCCAAACATTGCCT
GTCGTGAAAAGCTTTCTGACCGATGCATTACGGCNTCAATGCTTCCCTCCATTGTTCTTT
ACACAGCACGAAGGGAATTCAACAACAGAACTTTTCCAACACACATACCTTTACTAA

Peptide Sequence

PEP ID

XP_016494526.1
PEP Infomation

PREDICTED: tetratricopeptide repeat protein 7B-like [Nicotiana tabacum]
Sequence

MFLVVGELFWIIEFLFQFCNWLNPLCLAQLRRLCLGEQLRIEDIIPSSESLATRDYSASG
YSSRAGDDAKADTSNIEEAESSLRESGILNYEEARALLGRLEYQKGNIEAALHVFEGIDI
AAVVPKIKLSIARRCEIPRRNSLSDAIPPMSMHAVSLLFEAILLKATSLQALGRFTEAAQ
SCTVILDTVESALPDGLHENFSADCKLLETLNKAVELLPELWKLACAPQEAILSYRRALL
YRWNLDVETRSKIEKQYAIFLLYSGTDAAPPNLRAQAEGSFIPRNNIEEAILLLLVLLRR
YIVNKIVWDPSILDHLCFALSIAGEFRALAHQVEELLPGIVVRRQKYTTLALCYYAEGDD
MVSLNLLRNLMNNRDNENGIFELLLAAKICAEYPNLSEEGMGYARKVLPKIDGKCNQMAS
VAKCLLGLLLSGRSRALVSDSERTSRLSEALESLESAQKITEGRNPTVLFYLSLENAEQR
KLDIALYYAKQLLKLEGGSTVRGWLLLARILSAQKRYIDAENIINAALDETGKWNQGELL
RTKAKLQIAQEHLRDAVETYTHLLSVLQVQRKSFGVQKKLLKNMRNNTRSLEMETWHDLA
NVYTSLSQWRDAEVCLIKSEAINPHSASRCHSAGLLYQARGLHKEALQSFQKALDIEPNH
VPSLVSTAIVLRQLSGQTLPVVKSFLTDALRXQCFPPLFFTQHEGNSTTELFQHTYLY

Transcript Sequence

Gene sequence data has not been registered.